Chinese homepage link: http://phylosuite.jushengwu.com/
For the basic operation of PhyloSuite, please see http://phylosuite.jushengwu.com/dongzhang0725.github.io/documentation/#4-1-0-1-Brief-example.
When starting a new project, it’s recommended to create a new workplace for it.
- Hovering over
WorkPlacemenu bar will popup available workplaces, select
Othersto open the
add buttonto select a workplace folder.
Work folders are where you can deposit input data and results for different analyses.
- Click the green
- Enter the new work folder name.
Please see five ways to import sequences into PhyloSuite.
You can access a brief example demo of each function via the question mark button in the window of the corresponding function. For example:
By default, if you select a work folder or a results folder in a work folder before opening the function window, the results will be deposited in the selected work folder. Otherwise, the results will be deposited in
Other_File/files work folder. You can select a work folder via the ‘down arrow’ menu of the Start button in each function.
Starting with the version 1.1.15, PhyloSuite allows results of multiple analyses to be stored within each results folder in different output directories within a single Results folder. The default format of the directory name is:
year_month_day-hour_minute_second, but you can change it according to your preferences.
You can remove results you don’t need any more through the
Remove function, accessed via the right-click menu.
However, we recommend to remove them in your local file system, as that will enable you to recover them using the inbuilt operating system file recovery function. You can enter the local file system via the
Open in file explorer option (see the figure above).
Other demo tutorials can be seen here.